Xena Public Data Hubs
We host public hubs with -omic data and sample annotations from several large consortium:
Aims to generate comprehensive, multi-dimensional maps of the key genomic changes in major types and subtypes of cancer.
Aims to provides the cancer research community with a unified data repository across cancer genomic studies.
Aims to obtain a comprehensive description of genomic, transcriptomic and epigenomic changes in 50 different tumor types and/or subtypes which are of clinical and societal importance across the globe.
Aims to provide to the scientific community a resource with which to study human gene expression and regulation and its relationship to genetic variation.
Applies a comprehensive genomic approach to determine molecular changes that drive childhood cancers.
The goal of the Toil recompute was to process ~20,000 RNA-seq samples to create a consistent meta-analysis of four datasets free of computational batch effects.